biggr.cobra
===========

.. py:module:: biggr.cobra


Attributes
----------

.. autoapisummary::

   biggr.cobra.METABOLITE_ANNOTATION_PRIORITY


Functions
---------

.. autoapisummary::

   biggr.cobra.find_metabolite
   biggr.cobra.update_metabolite


Module Contents
---------------

.. py:data:: METABOLITE_ANNOTATION_PRIORITY
   :value: ['BiGGr', 'BiGG', 'CHEBI', 'seed.compound']


.. py:function:: find_metabolite(metabolite: cobra.Metabolite, cobra_id_namespace='BiGGr', default_compartment=None)

.. py:function:: update_metabolite(metabolite: cobra.Metabolite, compartmentalized_component: biggr.models.CompartmentalizedComponent)