2.1.1. bigg.cobra

Attributes

METABOLITE_ANNOTATION_PRIORITY

Functions

find_metabolite(metabolite[, cobra_id_namespace, ...])
update_metabolite(metabolite, compartmentalized_component)

Module Contents

bigg.cobra.METABOLITE_ANNOTATION_PRIORITY = ['BiGGr', 'BiGG', 'CHEBI', 'seed.compound']

bigg.cobra.find_metabolite(metabolite: cobra.Metabolite, cobra_id_namespace='BiGGr', default_compartment=None)

bigg.cobra.update_metabolite(metabolite: cobra.Metabolite, compartmentalized_component: bigg.models.CompartmentalizedComponent)