biggr.cobra

2.1.1. biggr.cobra#

Attributes#

METABOLITE_ANNOTATION_PRIORITY

Functions#

find_metabolite(metabolite[, cobra_id_namespace, ...])

update_metabolite(metabolite, compartmentalized_component)

Module Contents#

biggr.cobra.METABOLITE_ANNOTATION_PRIORITY = ['BiGGr', 'BiGG', 'CHEBI', 'seed.compound']#
biggr.cobra.find_metabolite(metabolite: cobra.Metabolite, cobra_id_namespace='BiGGr', default_compartment=None)#
biggr.cobra.update_metabolite(metabolite: cobra.Metabolite, compartmentalized_component: biggr.models.CompartmentalizedComponent)#