biggr_models.handlers.gene_handlers

Classes

GeneListViewHandler	Request handler that implements data tables (API) logic.
GeneHandler	Base RequestHandler that handles standard requests.
GenomeGeneHandler	Base RequestHandler that handles standard requests.
GenesInGenomeListViewHandler	Request handler that implements data tables (API) logic.

Module Contents

class biggr_models.handlers.gene_handlers.GeneListViewHandler(application: Application, request: tornado.httputil.HTTPServerRequest, **kwargs: Any)

Bases: biggr_models.handlers.utils.DataHandler

Request handler that implements data tables (API) logic.

title = 'Genes'

model_bigg_id: str | None = None

page_data

column_specs

pre_filter(query)

breadcrumbs()

class biggr_models.handlers.gene_handlers.GeneHandler(application: Application, request: tornado.httputil.HTTPServerRequest, **kwargs: Any)

Bases: biggr_models.handlers.utils.BaseHandler

Base RequestHandler that handles standard requests.

template

get(model_bigg_id, gene_bigg_id)

class biggr_models.handlers.gene_handlers.GenomeGeneHandler(application: Application, request: tornado.httputil.HTTPServerRequest, **kwargs: Any)

Bases: biggr_models.handlers.utils.BaseHandler

Base RequestHandler that handles standard requests.

template

get(accession_type, accession_value, gene_bigg_id)

class biggr_models.handlers.gene_handlers.GenesInGenomeListViewHandler(application: Application, request: tornado.httputil.HTTPServerRequest, **kwargs: Any)

Bases: biggr_models.handlers.utils.DataHandler

Request handler that implements data tables (API) logic.

title = 'Genes in Genome'

accession_type: str | None = None

accession_value: str | None = None

page_data

column_specs

pre_filter(query)