Overview

Teaching: 30 min
Exercises: 30 min

Questions

• How can I add missing reactions to a model?

• How can I delete a gene from a model?

Objectives

• Understanding the basic mechanisms of adding and removing content from a model.

Key Points

• cameo.util.TimeMachine provides a convenient way to undo changes to models in order to avoid copies.

• reaction.change_bounds allows one to change the lower and upper bound of reaction simultaneously.

• Reaction and Metabolite can be used to define reactions.

• model.add_reaction(reaction) adds reaction to model.

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