Non-Native Compounds

List of all compounds not native to E. coli included in the growth coupling design database.

Acyl-CoA

C00040

Indirect
Carboxylate

C00060

Indirect
Aldehyde

C00071

Indirect
Catechol

C00090

Indirect
Phenol

C00146

Indirect
L-Amino acid

C00151

amn3
2.6.1.12
Phosphatidylcholine

C00157

Indirect
2-Oxo acid

C00161

Indirect
Fatty acid

C00162

Indirect
Diacylglycerol

C00165

Indirect
Acyl-[acyl-carrier protein]

C00173

Indirect
Benzoate

C00180

Indirect
D-Glucono-1,5-lactone

C00198

Indirect
Methylamine

C00218

hdg4
1.21.4.3
beta-D-Glucose

C00221

Indirect
p-Coumaroyl-CoA

C00223

Indirect
3,4-Dihydroxybenzoate

C00230

Indirect
CO

C00237

mth5
4.1.99.17
Benzaldehyde

C00261

Indirect
CDP-diacylglycerol

C00269

Indirect
2-Oxoadipate

C00322

amn1_rev
2.6.1.39
Caffeoyl-CoA

C00323

Indirect
L-Kynurenine

C00328

Indirect
Indolepyruvate

C00331

amn1_rev, amn3_rev
2.6.1.27, 2.6.1.99
Ethanolamine phosphate

C00346

Indirect
2-Methyl-3-oxopropanoate

C00349

Indirect
Phosphatidylethanolamine

C00350

Indirect
Geranylgeranyl diphosphate

C00353

Indirect
3,4-Dihydroxy-L-phenylalanine

C00355

Indirect
Carnosine

C00386

Indirect
Histamine

C00388

Indirect
Feruloyl-CoA

C00406

Indirect
Phosphatidate

C00416

Indirect
Triacylglycerol

C00422

Indirect
5-Aminopentanoate

C00431

amn1
2.6.1.48
(S)-2,3,4,5-Tetrahydropyridine-2-carboxylate

C00450

Indirect
Glutarate

C00489

Indirect
Homogentisate

C00544

Indirect
CDP-ethanolamine

C00570

Indirect
Sulfoacetaldehyde

C00593

amn1_rev, amn3_rev
2.6.1.55, 2.6.1.77
2-Hydroxy-2,4-pentadienoate

C00596

Indirect
3-Hydroxyanthranilate

C00632

Indirect
4-Hydroxybenzaldehyde

C00633

Indirect
Indole-3-acetaldehyde

C00637

Indirect
1,2-Diacyl-sn-glycerol

C00641

Indirect
1-Acyl-sn-glycerol 3-phosphate

C00681

Indirect
2-Hydroxymuconate semialdehyde

C00682

Indirect
trans-2,3-Dehydroacyl-[acyl-carrier protein]

C00693

Indirect
Squalene

C00751

Indirect
4-Hydroxy-3-methoxy-benzaldehyde

C00755

Indirect
Salicylate

C00805

Indirect
4-Coumarate

C00811

Indirect
L-Arogenate

C00826

amn1
2.6.1.79
3-Oxoadipate

C00846

Indirect
2-Oxoglutaramate

C00940

amn3_rev
2.6.1.15
Indole-3-acetate

C00954

Indirect
L-2-Aminoadipate

C00956

amn1
2.6.1.39
5-Aminopentanamide

C00990

Indirect
N-Methylnicotinate

C01004

mth1
2.1.1.7
Trimethylsulfonium

C01008

mth1, mth2
2.1.1.19, 2.1.1.96
N,N-Dimethylglycine

C01026

mth1
2.1.1.156, 2.1.1.157, 2.1.1.162
4-Maleylacetoacetate

C01036

Indirect
4-Fumarylacetoacetate

C01061

Indirect
5-Amino-2-oxopentanoic acid

C01110

amn1_rev
2.6.1.8
3-Carboxy-cis,cis-muconate

C01163

Indirect
4-Methylthio-2-oxobutanoic acid

C01180

amn3_rev, amn4_rev
2.6.1.41, 2.6.1.73
Caffeate

C01197

Indirect
(R)-3-Amino-2-methylpropanoate

C01205

amn3
2.6.1.40
N-Methylethanolamine phosphate

C01210

mth1
2.1.1.103
Phosphatidyl-N-methylethanolamine

C01241

mth1
2.1.1.17
(R)-2-Hydroxybutane-1,2,4-tricarboxylate

C01251

Indirect
4-(2-Aminophenyl)-2,4-dioxobutanoate

C01252

amn1_rev, amn4_rev
2.6.1.63, 2.6.1.7
beta-Alanyl-N(pi)-methyl-L-histidine

C01262

mth1
2.1.1.22
2-Carboxy-2,5-dihydro-5-oxofuran-2-acetate

C01278

Indirect
Anisole

C01403

mth1
2.1.1.25
Gallate

C01424

Indirect
Neamine

C01441

amn1
2.6.1.93
Ferulate

C01494

mth1
2.1.1.68
4-Hydroxy-2-quinolinecarboxylic acid

C01717

amn1_rev, amn4_rev
2.6.1.63, 2.6.1.7
Paromamine

C01743

Indirect
1-Acylglycerol

C01885

Indirect
(R)-Mandelate

C01983

Indirect
(S)-Mandelate

C01984

Indirect
(S)-Ureidoglycine

C02091

amn4
2.6.1.112
Acyl phosphate

C02133

Indirect
alpha-Oxo-benzeneacetic acid

C02137

Indirect
Chlorophyllide

C02139

Indirect
2-Aminomuconate

C02220

Indirect
N-Methyltyramine

C02442

mth1
2.1.1.27
Xanthurenic acid

C02470

amn4_rev
2.6.1.63
alpha-Tocopherol

C02477

mth1
2.1.1.95
gamma-Tocopherol

C02483

Indirect
2-Deoxystreptamine

C02627

Indirect
L-Formylkynurenine

C02700

Indirect
N-Methylputrescine

C02723

mth1
2.1.1.53
4,5-Dioxopentanoate

C02800

amn3_rev
2.6.1.43
Protochlorophyllide

C02880

Indirect
1-Methylnicotinamide

C02918

mth1
2.1.1.1
N-Methylanthranilate

C03005

mth1
2.1.1.111
Phosphonoacetaldehyde

C03167

amn3_rev
2.6.1.37
(S)-4-Hydroxymandelate

C03198

Indirect
3-Hydroxy-L-kynurenine

C03227

Indirect
5-Oxopentanoate

C03273

amn1_rev
2.6.1.48
Imidazol-5-yl-pyruvate

C03277

amn1_rev
2.6.1.38
Nalpha-Methylhistidine

C03298

mth1
2.1.1.44
Aminoimidazole ribotide

C03373

Indirect
Fatty acid methyl ester

C03395

mth1
2.1.1.15
Presqualene diphosphate

C03428

Indirect
gamma-Oxalocrotonate

C03453

Indirect
D-4-Hydroxyphenylglycine

C03493

amn1
2.6.1.72
Deoxy-5-methylcytidylate

C03495

mth4
2.1.1.54
Magnesium protoporphyrin

C03516

Indirect
2-Aminoethylphosphonate

C03557

amn3
2.6.1.37
Resveratrol

C03582

Indirect
2-Oxo-2,3-dihydrofuran-5-acetate

C03586

Indirect
4-Hydroxyphenylglyoxylate

C03590

Indirect
D-Bornesitol

C03659

mth1
2.1.1.40
L-Bornesitol

C03660

mth1
2.1.1.39
5-Guanidino-2-oxopentanoate

C03771

Indirect
2-Aminomuconate semialdehyde

C03824

Indirect
N(omega)-Methyl-L-arginine

C03884

mth1
2.1.1.381
3-Hydroxy-4-methylanthranilate

C03986

mth1
2.1.1.97
(Z)-But-1-ene-1,2,4-tricarboxylate

C04002

Indirect
S,S-Dimethyl-beta-propiothetin

C04022

mth2
2.1.1.269
3-(3,4-Dihydroxyphenyl)pyruvate

C04045

amn1_rev
2.6.1.49
L-2-Aminoadipate 6-semialdehyde

C04076

amn1_rev, amn3_rev
2.6.1.36, 2.6.1.71
4-Carboxy-4-hydroxy-2-oxoadipate

C04115

Indirect
all-trans-Nonaprenyl diphosphate

C04145

Indirect
N,N-Dimethylhistidine

C04259

mth1
2.1.1.44
dTDP-4-amino-4,6-dideoxy-D-glucose

C04268

amn1
2.6.1.33
4-(3-Methylbut-2-enyl)-L-tryptophan

C04290

Indirect
Phosphatidyl-N-dimethylethanolamine

C04308

mth1
2.1.1.71
2-Amino-3-carboxymuconate semialdehyde

C04409

Indirect
(1E)-4-Oxobut-1-ene-1,2,4-tricarboxylate

C04434

Indirect
Magnesium protoporphyrin monomethyl ester

C04536

mth1
2.1.1.11
4-Amino-2-methyl-5-(phosphooxymethyl)pyrimidine

C04556

mth5
4.1.99.17
UDP-N-acetyl-2-amino-2-deoxy-D-glucuronate

C04573

Indirect
UDP-2-acetamido-4-dehydro-2,6-dideoxyglucose

C04613

Indirect
UDP-2-acetamido-4-amino-2,4,6-trideoxy-alpha-D-glucose

C04630

amn1
2.6.1.34
3-Aminobutanoyl-CoA

C05117

amn1
2.6.1.111
N-Methylhistamine

C05127

mth1
2.1.1.8
Nicotianamine

C05324

Indirect
Phytyl diphosphate

C05427

Indirect
Hercynine

C05575

mth1
2.1.1.44
3-O-Methylgallate

C05616

mth2
2.1.1.341
4-(2-Amino-3-hydroxyphenyl)-2,4-dioxobutanoate

C05645

amn4_rev
2.6.1.63
Homoisocitrate

C05662

Indirect
Precorrin 3A

C05772

mth1
2.1.1.130
Precorrin 6Y

C06319

Indirect
Precorrin 6X

C06320

mth1
2.1.1.152
4-O-Methyl-myo-inositol

C06352

mth1
2.1.1.129
Precorrin 3B

C06406

Indirect
Precorrin 4

C06407

mth1
2.1.1.131
Precorrin 8X

C06408

mth1
2.1.1.132
Precorrin 5

C06416

mth1
2.1.1.133
2-Hydroxyethylphosphonate

C06451

Indirect
Vanillate

C06672

mth2
2.1.1.341
4-Hydroxy-3-methoxyphenyl-beta-hydroxypropanoyl-CoA

C07303

Indirect
Theobromine

C07480

mth1
2.1.1.159, 2.1.1.160
Caffeine

C07481

mth1
2.1.1.160
3-(Methylthio)propanoate

C08276

Indirect
Isoliquiritigenin

C08650

Indirect
Pterostilbene

C10287

mth1
2.1.1.240
3,4-Dihydroxyphenylpropanoate

C10447

Indirect
Isoeugenol

C10469

Indirect
Methylisoeugenol

C10478

mth1
2.1.1.146, 2.1.1.279
(E)-2-(Methoxycarbonylmethyl)butenedioate

C11515

mth1
2.1.1.145
Cobalt-sirohydrochlorin

C11538

Indirect
13(1)-Hydroxy-magnesium-protoporphyrin IX 13-monomethyl ester

C11829

mth5
1.21.98.3
13(1)-Oxo-magnesium-protoporphyrin IX 13-monomethyl ester

C11830

mth5
1.21.98.3
Divinylprotochlorophyllide

C11831

mth5
1.21.98.3
3,6-Dideoxy-3-oxo-dTDP-D-glucose

C11908

Indirect
dTDP-3-amino-3,6-dideoxy-D-glucose

C11925

amn1
2.6.1.89
dTDP-D-mycaminose

C11933

mth1
2.1.1.235
3,5-Dihydroxy-phenylglycine

C12026

amn1
2.6.1.103
3-Amino-4-hydroxybenzoate

C12115

Indirect
Kanosamine 6-phosphate

C12213

amn1
2.6.1.104
Methyl salicylate

C12305

mth1
2.1.1.274
3,5-Dihydroxyphenylacetyl-CoA

C12324

Indirect
3,5-Dihydroxyphenylglyoxylate

C12325

Indirect
delta-Tocopherol

C14151

Indirect
beta-Tocopherol

C14152

mth1
2.1.1.95
alpha-Tocotrienol

C14153

mth1
2.1.1.95
beta-Tocotrienol

C14154

mth1
2.1.1.95
gamma-Tocotrienol

C14155

Indirect
delta-Tocotrienol

C14156

Indirect
3''-Deamino-3''-oxonicotianamine

C15486

amn1_rev
2.6.1.80
Precorrin 1

C15527

mth1
2.1.1.107
2'-O-Methylisoliquiritigenin

C15531

mth1
2.1.1.154
1,2-Dihydroxy-5-(methylthio)pent-1-en-3-one

C15606

Indirect
2-Methyl-6-phytylquinol

C15882

Indirect
2,3-Dimethyl-5-phytylquinol

C15883

mth1
2.1.1.295
7-Methylxanthosine

C16352

mth1
2.1.1.158
7-Methylxanthine

C16353

Indirect
Vanillylamine

C16666

amn3
2.6.1.119
Plastoquinol-9

C16695

mth1
2.1.1.295
2-Deoxy-scyllo-inosose

C17209

Indirect
Cobalt-factor III

C17401

mth1
2.1.1.151
2-Methyl-6-solanyl-1,4-benzoquinol

C17570

Indirect
2-Deoxy-scyllo-inosamine

C17580

Indirect
3-Amino-2,3-dideoxy-scyllo-inosose

C17581

mth5
1.1.99.38
2'-N-Acetylparomamine

C17582

Indirect
6'-Dehydro-6'-oxoparomamine

C17583

Indirect
8-Ethyl-12-methyl-3-vinylbacteriochlorophyllide d

C18157

Indirect
7,8-Didemethyl-8-hydroxy-5-deazariboflavin

C19154

mth5
4.3.1.32
Malonyl-[acp] methyl ester

C19673

mth1
2.1.1.197
7-Chloro-L-tryptophan

C19687

Indirect
2-Imino-3-(7-chloroindol-3-yl)propanoate

C19688

Indirect
3,4-Bis(7-chloroindol-3-yl)pyrrole-2,5-dicarboxylate

C19698

Indirect
Dichloroarcyriaflavin A

C19699

Indirect
4'-O-Demethylrebeccamycin

C19700

Indirect
Rebeccamycin

C19701

mth1
2.1.1.164
UDP-2-acetamido-2,6-dideoxy-beta-L-arabino-hexos-4-ulose

C19823

Indirect
dTDP-3-amino-3,6-dideoxy-alpha-D-galactopyranose

C19947

amn1
2.6.1.90
dTDP-3-dimethylamino-3,6-dideoxy-alpha-D-galactopyranose

C19948

mth1
2.1.1.236
dTDP-3-dehydro-6-deoxy-alpha-D-galactopyranose

C19960

Indirect
UDP-4-amino-4,6-dideoxy-N-acetyl-beta-L-altrosamine

C19961

amn1
2.6.1.92
3-Methoxy-4',5-dihydroxy-trans-stilbene

C20154

mth1
2.1.1.240
5-Guanidino-3-methyl-2-oxopentanoate

C20234

mth1
2.1.1.243
(E)-2-Methylgeranyl diphosphate

C20235

mth1
2.1.1.255
UDP-2-acetamido-3-amino-2,3-dideoxy-alpha-D-glucuronate

C20359

amn1
2.6.1.98
UDP-2-acetamido-2-deoxy-alpha-D-ribo-hex-3-uluronate

C20395

Indirect
4-Dimethylallyl-L-abrine

C20410

mth1
2.1.1.261
3-Methyl-1,2-didehydro-2,3-dihydrosqualene

C20411

mth1
2.1.1.262
3,22-Dimethyl-1,2,23,24-tetradehydro-2,3,22,23-tetrahydrosqualene

C20412

mth1
2.1.1.262
C30 Botryococcene

C20432

Indirect
3-Methyl-1,2-didehydro-2,3-dihydrobotryococcene

C20433

mth1
2.1.1.263
20-Methyl-21,22-didehydro-20,21-dihydrobotryococcene

C20434

mth1
2.1.1.263
3,20-Dimethyl-1,2,21,22-tetradehydro-2,3,20,21-tetrahydrobotryococcene

C20435

mth1
2.1.1.263
Cyclopeptine

C20579

mth1
6.3.2.40
GDP-4-dehydro-3,6-dideoxy-alpha-D-mannose

C20612

amn1
4.2.1.168
O-Methyl anthranilate

C20634

mth1
2.1.1.277
Methyl (indol-3-yl)acetate

C20635

mth1
2.1.1.278
GDP-4-amino-4,6-dideoxy-alpha-D-mannose

C20638

amn1
2.6.1.102
2-Amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate

C20644

Indirect
Methyl benzoate

C20645

mth1
2.1.1.273
(3S)-2-Oxo-3-phenylbutanoate

C20646

mth1
2.1.1.281
3-Dehydro-D-glucose 6-phosphate

C20668

Indirect
6-Geranylgeranyl-2-methylbenzene-1,4-diol

C20737

Indirect
6-Geranylgeranyl-2,3-dimethylbenzene-1,4-diol

C20738

mth1
2.1.1.295
3-Methyl-L-tyrosine

C20800

mth1
2.1.1.304
5-Methyl-1-naphthoate

C20803

Indirect
3-Hydroxy-5-methyl-1-naphthoate

C20805

Indirect
UDP-2-acetamido-3-dehydro-2-deoxy-alpha-D-glucopyranose

C20849

Indirect
(2S,3S)-3-Methylphenylalanine

C20895

amn1
2.6.1.107
(5-Formylfuran-3-yl)methyl phosphate

C20954

Indirect
3-Methoxy-5-methyl-1-naphthoate

C20980

mth1
2.1.1.302
[5-(Aminomethyl)furan-3-yl]methyl phosphate

C21068

amn3
2.6.1.108
Dihydromonacolin L-[acyl-carrier protein]

C21108

mth1
2.3.1.161
(S)-2-Methylbutanoyl-[acp]

C21129

mth1
2.3.1.244
(R)-3-(Indol-3-yl)-2-oxobutyrate

C21289

mth1
2.1.1.47
8,12-Diethyl-3-vinylbacteriochlorophyllide d

C21427

mth1
2.1.1.331
12-Ethyl-8-propyl-3-vinylbacteriochlorophyllide d

C21428

mth1
2.1.1.332
(+)-Kolavelool

C21653

Indirect
(+)-Kolavenyl diphosphate

C21654

Indirect
Ornithine lipid

C21672

Indirect
N-Methylornithine lipid

C21673

mth1
2.1.1.344
N,N-Dimethylornithine lipid

C21674

mth1
2.1.1.344
N,N,N-Trimethylornithine lipid

C21675

mth1
2.1.1.344
Lyso-ornithine lipid

C21680

Indirect
(+)-O-Methylkolavelool

C21800

mth1
2.1.1.347
5-Amino-5-(4-hydroxybenzyl)-6-(D-ribitylimino)-5,6-dihydrouracil

C21971

mth5
2.5.1.147
(2E,5S,6E,8E,10E)-5-Hydroxydodeca-2,6,8,10-tetraenal

C22087

Indirect
(2E,5S,6E,8E,10E)-1-Aminododeca-2,6,8,10-tetraen-5-ol

C22091

amn3
2.6.1.115
Pre-sodorifen diphosphate

C22209

mth1
2.1.1.363
4a-Hydroxy-5,6,7,8-tetrahydropteridine

C22239

Indirect
3-Amino-2-hydroxy-4-methoxybenzoate

C22425

mth1
2.1.1.380
UDP-2-acetamido-3-amino-2,3-dideoxy-alpha-D-glucopyranose

C22427

amn1
2.6.1.122
3-Amino-2,4-dihydroxybenzoate

C22455

Indirect